GENETIC STUDIES ON PHYSIOLOGICAL AND AGRONOMIC TRAITS SUITABLE FOR DIRECT SEEDING IN RICE (Oryza sativa L.)

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Date
2017
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Acharya N.G. Ranga Agricultural University
Abstract
Rice is commonly grown by transplanting seedlings into puddled soil. Puddling and transplanting require huge amounts of water and labour, both of which are becoming increasingly scarce and expensive, making its production less profitable. Under the situation of water and labour scarcity, farmers are changing their crop establishment method transplanting to direct seeding. This rambles the need of varietal improvement for traits viz., early seedling vigour for weed competitiveness; anaerobic germination and tolerance of early submergence; dense root system for drought resistance and culm thickness for lodging resistance, which are highly essential for good crop establishment in direct seeding conditions. Present investigation was aimed to characterize the elite rice cultivars for the traits related to direct seeding and yield; to work out the genetics of the traits related to direct seeding by using established molecular markers. The genetic variability studies revealed that significant differences among the genotypes for all the 19 characters studied indicating the existence of high degree of variability in the material. The estimates of heritability and genetic advance as per cent of mean were high for the characters viz., days to 50% flowering, plant height, leaf area index, number of productive tillers per plant, total number of tillers per m2 , test weight, grain yield per plant, biological yield per plant, seedling root length, seedling shoot length, seedling vigour index and basal culm diamter. Genetic diversity among 48 elite rice cultivars for direct seeding traits was determined using 10 SSR markers (two each for the five direct seeding traits viz., Anaerobic germination, seedling root length, seedling shoot length, rate of germination, culm diameter) and estimated magnitude of genetic diversity for 19 agronomic and physiological traits viz., days to 50% flowering, plant height (cm), leaf area index, number of productive tillers per plant, total number of tillers per m 2 , panicle length (cm) number of filled grains per panicle, number of total grains per panicle, spikelet fertility (%), test weight (g), grain yield per plant (g), biological yield per plant (g), seedling root length (mm), seedling shoot length (mm), vigour index and basal culm diameter (mm) with D2 analysis. All the ten SSR loci were polymorphic and produced 36 alleles. The number of alleles per locus generated by each marker varied from 2 to 5 alleles with an average of 3.6 alleles per locus. Polymorphic information content (PIC) of these markers ranged from 0.305 to 0.797 with an average of 0.628 indicated potentialities of these markers for assessing genetic diversity. Based on molecular diversity and D2 analysis seven parents (MTU 3626, MTU 1010, MTU 1121, MTU 1140, PS-140- 1, AC39416A) were selected and crossed in Griffing’s diallel fashion (Method-2, model-I) during Rabi, 2014-15 to generate 21 F1s. Evaluation of the 21 F1s along with parents was done in kharif, 2015-16. The ANOVA for combining ability revealed that parents and crosses had significant amount of variability for all the characters. The component of variance due to both gca and sca were significant for all the characters studied indicating the role of both additive and non-additive gene actions in governing the inheritance of these traits. Among the seven parents studied for their combining ability pertaining to nineteen different characters, the line, PS-140-1 recorded significant gca effects in desirable direction for majority of the characters followed by AC39416 A, MTU 1121, MTU 1140 and MTU 1156. Heterosis studies revealed that 15 out of 21 crosses registered significant positive heterosis over both mid and better parents for grain yield per plant. The best heterotic combination identified were MTU 3626 × PS-140-1 for important yield contributing traits; MTU 1140 × AC39416 and MTU 1140 × PS-140-1 for direct seeding traits. In the present study, an effort was also made to generate genotyping data of two F2 populations viz., MTU 3626 × PS-140-1 and MTU 1121 × PS-140-1 (100 individuals each) using the 10 SSR markers which were used earlier for screening of genotypes for direct seeding traits. The markers that linked to anaerobic germination (RM341, RM206); seedling root length (RM201, RM234); seedling shoot length (RM17, RM263): rate of germination (RM231) and culm diameter (RM20557, RM5509) were segregated in expected genetic ratio i.e., 1: 2: 1 for which the χ2 values were non significant against table value. The marker RM7, linked to rate of germination showed segregation distortion for the cross MTU 3626 × PS-140-1 progeny by not segregating in the expected genetic ratio 1:2:1 and showed high, significant χ2 value. The results revealed the usefulness of the studied SSR makers in marker assisted selection of direct seeding traits.
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D5436
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