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  • ThesisItemOpen Access
    Marker assisted selection for milk production traits in vechur cattle
    (Department of Animal Breeding and Genetics, College of Veterinary and Animal Sciences Mannuthy, 2005) Shymaja, Uthaman; Raghunandanan, K V
  • ThesisItemOpen Access
    Evaluation of porcine immune responses among different genetic groups
    (Department of Animal Breeding and Genetics, College of Veterinary and Animal Sciences, Mannuthy, 2005) Jeeeba K George; KAU; Rajan, M R
    Porcine immune responses were evaluated using PHA skin test and microhaemolytic assay in this study. Investigation was undertaken in three genetic groups namely Desi, Large White Yorkshire and Duroc x Large White Yorkshire. The economic traits studied were birth weight, litter size at birth, weaning litter size and weaning body weight. The cell-mediated immune response was assessed by noting cutaneous response to intradermal injection of phytohaemagglutinin. Humoral immune response was assessed by noting antibody response to sheep red blood cells. Correlation of immune response with growth, disease occurrence and mortality among the littermates were also evaluated. The highest birth weight, body weight at weaning, litter size at birth and weaning were recorded in Duroc x Large White Yorkshire, medium in Large White Yorkshire and least in Desi. The increase in skin thickness at 24, 48 and 72 hour post- injection of PHA-M was highest in Desi, medium in Duroc x Large White Yorkshire and least in Large White Yorkshire. The correlations of cutaneous response to phytohaemagglutinin with pre- weaning mortality among littermates and enteritis were found to be non-significant in Desi, Large White Yorkshire and Duroc x Large White Yorkshire piglets. Among three genetic groups, serum samples from Desi piglets had a higher mean antibody titre on 7th, 14th, 21st day than the other two. Medium titre was noted in Duroc x Large White Yorkshire and least in Large White Yorkshire. Sire effect was highly significant with antibody response on seventh, fourteenth and 21st day post inoculation. The correlations of antibody response to sheep RBC with pre- weaning mortality among littermates and enteritis were also found to be non-significant in Desi, Large White Yorkshire and Duroc x Large White Yorkshire piglets. The effects of sires within Desi, Large White Yorkshire and Duroc x Large White Yorkshire were found to be highly significant (P<0.01) on antibody response to sheep RBC on 7th, 14th and 21st day. Different litter traits had no significant effect on cutaneous response to PHA-M and antibody response to sheep RBC. High heritabilities were estimated for pre-injection skin thickness, cutaneous response to PHA-M at 24, 48, 72 hour post-injection and antibody response to sheep red blood cells on 7th, 14th, 21st day post- inoculation. Correlations of antibody response to sheep RBC on 14th day with cutaneous response to phytohaemagglutinin at 24 hour and 48 hour were found to be non-significant. Antibody response to sheep RBC on 21st day correlated non-significantly with cutaneous response to PHA-M at 24 hour and 48 hour. Antibody response to sheep RBC on 7th, 14th and 21st day associated non-significantly with weaning body weight and pre-weaning mortality. Even though correlations were non-significant, they revealed a negative trend. The association between cutaneous response to PHA-M at 24 hour and birth weight was non-significant.
  • ThesisItemOpen Access
    Genetic diversity analysis of goat breeds using microsatellite markers
    (Department of Animal Breeding and Genetics, College of Veterinary and Animal Sciences, Mannuthy, 2005) Amrita Susan, Jacob; KAU; Aravindakshan, T V
    The study was undertaken to assess the genetic variability among four goat breeds of South India using microsatellite markers. Three breeds studied were native to Kerala. These were Malabari, Attappadi Black and non-descript goats of Thrissur. The fourth breed, Salem Black, originated in the Salem district of Tamil Nadu. Microsatellite analysis was carried out using four highly polymorphic bovine markers. Blood samples from 30 genetically unrelated animals of each breed were collected and used as a source of DNA. The phenol-chloroform extraction procedure was used and the mean yield of DNA obtained was 361.43±10.73 µg/five ml blood. The four markers selected for the study were, INRA63, ILSTS030, HUJII77 and BM6121. PCR conditions were standardised for all the primers. The forward primer of each primer pair used in the PCR assay was end labeled with γ32P-ATP prior to setting up of the PCR. M13 DNA was sequenced and used as the size standard. The PCR products were separated by denaturing polyacrylamide gel electrophoresis. Detection of the products was done by autoradiography. Gels after electrophoresis were dried and was set for autoradiography with X-ray film in a cassette fitted with intensifying screen. Allele sizes were obtained by comparing with the sequence of M13 single stranded DNA size standard. A total of eleven alleles were detected at the INRA63 locus. The mean heterozygosity and PIC values obtained were 0.774 and 0.743, respectively. Seventeen alleles were detected at the ILSTS30 locus. The mean values of heterozygosity and PIC were 0.878 and 0.866, respectively. Thirteen alleles were detected at the BM6121 locus with mean heterozygosity and PIC values of 0.851 and 0.833, respectively. The HUJII77 locus was the most polymorphic of all the four loci detecting 21 alleles. The mean heterozygosity and PIC values were 0.899 and 0.88, respectively. The allele frequency measures were used to estimate the Nei’s standard genetic distance among the populations using the PHYLIP package. The distance measures ranged from 0.388 to 0.224, with the highest value noticed between Salem Black and non-descript goats of Thrissur and the lowest between Malabari and non-descript animals. A dendrogram was constructed using the POPGENE program which grouped the Salem Black and Attappadi Black goats in one cluster and Malabari and the non-descript goats of Thrissur in another.